petsc-3.1-p5 설치 기록

module load compiler/pgi-9.0-4 mpi/mvapich-1.2.0

(1) sundials-2.3.0

$ tar xvzf sundials-2.3.0.tar.gz

$ cd sundials-2.3.0

$ ./configure --prefix=/home01/sunlsy/sundials

$ make

$ make install

(2) ParMetis-3.0

$ tar xvzf ParMetis-3.0.tar.gz

$ cd ParMetis-3.0

$ make

  

$ mkdir include

$ mkdir lib

$ cp *.h include

$ cp *.a lib

(3) petsc-3.1-p5

$ tar xvzf petsc-3.1-p5.tar.gz

$ cd petsc-3.1-p5

$ ./configure --with-sundials-dir=/home01/sunlsy/sundials \

  --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 \

  --with-parmetis-dir=/home01/sunlsy/ParMetis-3.0 \

  --download-superlu_dist=/home01/sunlsy/superlu_dist_2.4.tar.gz \

  --with-blas-lapack-dir=/applic/compilers/pgi/linux86-64/9.0-4/applib1/LAPACK

$ make PETSC_DIR=/home01/sunlsy/petsc-3.1-p5 PETSC_ARCH=linux-gnu-c-debug all

$ vi /home01/sunlsy/petsc-3.1-p5/linux-gnu-c-debug/conf/petscvariables

  PCC와 PCC_LINKER를 수정해 주세요.

  수정 전 : PCC = mpicc

  PCC_LINKER = mpicc

  수정 후 : PCC = mpicxx

  PCC_LINKER = mpicxx

(4) 환경설정

$ vi ~/.bashrc

아래 내용을 마지막에 추가해주세요.

export LD_LIBRARY_PATH="${LD_LIBRARY_PATH}:/home01/sunlsy/sundials/lib:\

/home01/sunlsy/petsc-3.1-p5/linux-gnu-c-debug/lib:/home01/sunlsy/ParMetis-3.0/lib"

$ source ~/.bashrc